miRBase entry: dsi-mir-1

Stem-loop dsi-mir-1


Accession
MI0009432
Description
Drosophila simulans dsi-mir-1 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
1 open access papers mention dsi-mir-1
(2 sentences)

Sequence

cagccuuugagaguuccaugcuuccuugcauucaauaguuauacucaagcauaUGGAAUGUAAAGAAGUAUGGAGcgaaaucuggcga
..(((.......((((((((((((.((((((((.((((((.......))).))).)))))))).)))))))))))).......)))..

Structure
ca   uuugaga            c        a   -   au 
  gcc       guuccaugcuuc uugcauuc aua guu  a
  |||       |||||||||||| |||||||| ||| |||  c
  cgg       cGAGGUAUGAAG AAUGUAAG Uau cga  u
ag   ucuaaag            A        G   a   ac 


Annotation confidence Not enough data
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Genome context
chr2L: 20052711-20052798 [+]

Database links

Mature dsi-miR-1

Accession MIMAT0008867
Description Drosophila simulans dsi-miR-1 mature miRNA
Sequence 54 - UGGAAUGUAAAGAAGUAUGGAG - 75
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218