miRBase entry: dvi-mir-263b

Stem-loop dvi-mir-263b


Accession
MI0009488
Description
Drosophila virilis dvi-mir-263b precursor miRNA
Gene family
MIPF0000122; mir-263


Sequence

uucauCUUGGCACUGGGAGAAUUCACAGucgauuacauaauauucuGUGGUUCUGCGGGUGCCAAAAUgua
..(((.((((((((.(.(((((.(((((...(((....)))...)))))))))).).)))))))).)))..

Structure
uu   C        G G     U     ucg   a 
  cau UUGGCACU G AGAAU CACAG   auu c
  ||| |||||||| | ||||| |||||   |||  
  gUA AACCGUGG C UCUUG GUGuc   uaa a
au   A        G G     -     uua   u 


Annotation confidence Not enough data
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Genome context
scaffold_13049: 24412528-24412598 [-]

Database links

Mature dvi-miR-263b-5p

Accession MIMAT0008921
Description Drosophila virilis dvi-miR-263b-5p mature miRNA
Sequence 6 - CUUGGCACUGGGAGAAUUCACAG - 28
Evidence experimental
Illumina [2]

Mature dvi-miR-263b-3p

Accession MIMAT0032052
Description Drosophila virilis dvi-miR-263b-3p mature miRNA
Sequence 47 - GUGGUUCUGCGGGUGCCAAAAU - 68
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218

  2. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372