Stem-loop dvi-mir-276b

Accession

MI0009508

Description

Drosophila virilis dvi-mir-276b precursor miRNA

Gene family

MIPF0000124; mir-276

Literature search

1 open access papers mention dvi-mir-276b
(3 sentences)

Sequence

accgaagucuauauaccaucAGCGAGGUAUAGAGUUCCUacgugcaaauugcaauaaucgUAGGAACUUAAUACCGUGCUCUuggagggcugucgac
..((((((((.....(((..((((.(((((.(((((((((((((((...)))).....))))))))))).))))).))))..))).))))).)))..

Structure

ac   -     auaua   uc    A     A           -----    a 
  cga agucu     cca  AGCG GGUAU GAGUUCCUacg     ugca  
  ||| |||||     |||  |||| ||||| |||||||||||     |||| a
  gcu ucggg     ggu  UCGU CCAUA UUCAAGGAUgc     acgu  
ca   g     ----a   UC    G     A           uaaua    u 

Annotation confidence Not enough data

Genome context

scaffold_13049: 16093217-16093313 [+]

Mature dvi-miR-276b-3p

• Accession: MIMAT0008942
• Description: Drosophila virilis dvi-miR-276b-3p mature miRNA
• Sequence: 61 - UAGGAACUUAAUACCGUGCUCU - 82
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-276b-5p

• Accession: MIMAT0032068
• Description: Drosophila virilis dvi-miR-276b-5p mature miRNA
• Sequence: 21 - AGCGAGGUAUAGAGUUCCU - 39
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372