miRBase entry: dwi-mir-306-1

Stem-loop dwi-mir-306-1


Accession
MI0009554
Description
Drosophila willistoni dwi-mir-306-1 precursor miRNA
Gene family
MIPF0000313; mir-306


Sequence

gcUCAGGUACUUAGUGACUCUCAAagaauauaucuagacuugagagacgcucuguaccuagacu
.((.((((((..((((.((((((((((.....)))....))))))).))))..))))))))...

Structure
--g  C      UU    A       ----   a 
   cU AGGUAC  AGUG CUCUCAA    aga u
   || ||||||  |||| |||||||    ||| a
   ga uccaug  ucgc gagaguu    ucu u
uca  -      uc    a       caga   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scf2_1100000004874: 29027-29090 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from dwi-mir-306-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-306

Accession MIMAT0008986
Description Drosophila willistoni dwi-miR-306 mature miRNA
Sequence 3 - UCAGGUACUUAGUGACUCUCAA - 24
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218