miRBase entry: dwi-mir-13b-1

Stem-loop dwi-mir-13b-1

Accession

MI0009557

Description

Drosophila willistoni dwi-mir-13b-1 precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

ccaugucguuaaaauguuugugacuuuauguugugucucuauucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((..(((....))).)))))))))).)))))))))))...)))

Structure

   -ug           u      cuu    uu   u 
cca   ucguuaaaaug uuguga   uaug  gug c
|||   ||||||||||| ||||||   ||||  |||  
ggu   AGCAGUUUUAC GACACU   AUac  uau u
   uUG           C      ---    -u   c

Annotation confidence Not enough data

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Genome context

scf2_1100000004902: 2143077-2143147 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dwi-mir-13b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-13b

Accession	MIMAT0008990
Description	Drosophila willistoni dwi-miR-13b mature miRNA
Sequence	46 - UAUCACAGCCAUUUUGACGAGU - 67
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218