miRBase entry: dwi-mir-281-2

Stem-loop dwi-mir-281-2

Accession

MI0009561

Description

Drosophila willistoni dwi-mir-281-2 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

cgaauagcgaaaugAAGAGAGCUAUCCGUCGACAGUccaguuuaauacauccgaauuguaauacUGUCAUGGAAUUGCUCUCUUUGUauaauauucg
((((((.....(((((((((((..(((((.((((((.((((((.........))))))....)))))))))))...)))))))))))....))))))

Structure

      gcgaa           -UA     C      ---c      aau 
cgaaua     augAAGAGAGC   UCCGU GACAGU    caguuu   a
||||||     |||||||||||   ||||| ||||||    ||||||   c
gcuuau     UGUUUCUCUCG   AGGUA CUGUca    guuaag   a
      -aaua           UUA     -      uaau      ccu

Annotation confidence Not enough data

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Genome context

scf2_1100000004954: 3242070-3242166 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-281-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-281-2-5p

Accession	MIMAT0009189
Description	Drosophila willistoni dwi-miR-281-2-5p mature miRNA
Sequence	15 - AAGAGAGCUAUCCGUCGACAGU - 36
Evidence	not_experimental

Mature dwi-miR-281-3p

Accession	MIMAT0008995
Description	Drosophila willistoni dwi-miR-281-3p mature miRNA
Sequence	65 - UGUCAUGGAAUUGCUCUCUUUGU - 87
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218