miRBase entry: dya-mir-305

Stem-loop dya-mir-305


Accession
MI0009640
Description
Drosophila yakuba dya-mir-305 precursor miRNA
Gene family
MIPF0000158; mir-305


Sequence

caugucuAUUGUACUUCAUCAGGUGCUCUGguguggcccguaacccggcacauguugaaguacacucaauaug
(((((....(((((((((.((.(((((..((.((........))))))))).)).)))))))))....)))))

Structure
     cuAU         U  G     CU  u  ggc 
caugu    UGUACUUCA CA GUGCU  Gg gu   c
|||||    ||||||||| || |||||  || ||    
guaua    acaugaagu gu cacgg  cc ca   c
     acuc         u  a     --  -  aug 


Annotation confidence Not enough data
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Genome context
chr2L: 5473629-5473701 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-305
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-305

Accession MIMAT0009067
Description Drosophila yakuba dya-miR-305 mature miRNA
Sequence 8 - AUUGUACUUCAUCAGGUGCUCUG - 30
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218