miRBase entry: dya-mir-6-3

Stem-loop dya-mir-6-3


Accession
MI0009650
Description
Drosophila yakuba dya-mir-6-3 precursor miRNA
Gene family
MIPF0000119; mir-6


Sequence

caaaaagaagggaacgguugcugaugauguaguucgaaacucucucaauuuaUAUCACAGUGGCUGUUCUUUUUuauuug
((((.((((((((((((((((((.((((((((...((.......))...)))))))))))))))))))))))))).))))

Structure
    a                  a        uuc  aa 
caaa agaagggaacgguugcug ugauguag   ga  c
|||| |||||||||||||||||| ||||||||   ||  u
guuu uUUUUUCUUGUCGGUGAC ACUAUauu   cu  c
    a                  -        uaa  cu 


Annotation confidence Not enough data
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Genome context
chr2R: 13624489-13624568 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from dya-mir-6-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-6

Accession MIMAT0009078
Description Drosophila yakuba dya-miR-6 mature miRNA
Sequence 53 - UAUCACAGUGGCUGUUCUUUUU - 74
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218