miRBase entry: dya-mir-288

Stem-loop dya-mir-288


Accession
MI0009668
Description
Drosophila yakuba dya-mir-288 precursor miRNA
Gene family
MIPF0000223; mir-288


Sequence

cggucaugucguaauuagcggagcacggcguugccggcgauaauuaaugacgguggucacguuggUUUCAUGUCGAUUUCAUUUCAUGacacggcc
.((((.((((((((((.(((((((.((((((.((((.((...........)).)))).)))))))))))..)).)))).......)))))).))))

Structure
c    a      -------    a  --     a      u    g  auaa 
 gguc ugucgu       aauu gc  ggagc cggcgu gccg cg    u
 |||| ||||||       |||| ||  ||||| |||||| |||| ||    u
 ccgg acaGUA       UUAG UG  CUUUg guugca uggu gc    a
-    c      CUUUACU    C  UA     -      c    g  agua 


Annotation confidence Not enough data
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Genome context
chr2R: 6966496-6966591 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-288
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-288

Accession MIMAT0009094
Description Drosophila yakuba dya-miR-288 mature miRNA
Sequence 66 - UUUCAUGUCGAUUUCAUUUCAUG - 88
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218