miRBase entry: bta-mir-128-2

Stem-loop bta-mir-128-2


Accession
MI0009727
Description
Bos taurus bta-mir-128-2 precursor miRNA
Gene family
MIPF0000048; mir-128

Literature search
7 open access papers mention bta-mir-128-2
(16 sentences)

Sequence

17682 reads, 182 reads per million, 74 experiments
ugugcagugggaaggggggccgaggcacuguccgagagugaguagcaggucUCACAGUGAACCGGUCUCUUUcccuacuguguc
...((((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).))))))))...

Structure
ugu        a          agg      cc    g gag 
   gcaguggg aggggggccg   cacugu  gaga u   u
   |||||||| ||||||||||   ||||||  |||| |    
   ugucaucc UUUCUCUGGC   GUGACA  CUcu g   a
cug        c          CAA      --    g acg 


Annotation confidence Not enough data
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Genome context
chr22: 9796002-9796085 [+]

Database links

Mature bta-miR-128

Accession MIMAT0003541
Description Bos taurus bta-miR-128 mature miRNA
Sequence 52 - UCACAGUGAACCGGUCUCUUU - 72
Evidence experimental
Array [2], qRT-PCR [2], cloned [3]

References

  1. PubMed ID: 19170227
    Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
    "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
    "Mol Reprod Dev (2009) 76:665-677

  2. PubMed ID: 19758457
    Characterization of bovine miRNAs by sequencing and bioinformatics analysis
    Jin W, Grant JR, Stothard P, Moore SS, Guan LL
    BMC Mol Biol (2009) 10:90

  3. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125