Stem-loop bta-mir-153-2

Accession

MI0009750

Description

Bos taurus bta-mir-153-2 precursor miRNA

Gene family

MIPF0000050; mir-153

Literature search

5 open access papers mention bta-mir-153-2
(7 sentences)

Sequence

828 reads, 16 reads per million, 61 experiments

agcgguggccagugucauuuuugugauguugcagcuaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauuggaaacugug
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).

Structure

a     gg      -             gu       -a  aa 
 gcggu  ccagug ucauuuuugugau  ugcagcu  gu  u
 |||||  |||||| |||||||||||||  |||||||  ||  a
 uguca  gguuaC AGUGAAAACACUG  ACGUUga  cg  u
g     aa      U             AU       cc  ag 

Annotation confidence Not enough data

Genome context

chr4: 119976209-119976295 [-]

Mature bta-miR-153

• Accession: MIMAT0009239
• Description: Bos taurus bta-miR-153 mature miRNA
• Sequence: 53 - UUGCAUAGUCACAAAAGUGAUC - 74
• Evidence: experimental ; Array [3], qRT-PCR [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125