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miRBase |
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Stem-loop sequence bta-mir-188 |
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Accession | MI0009760 (change log) | |||||||
Description | Bos taurus miR-188 stem-loop | |||||||
Gene family | MIPF0000113; mir-188 | |||||||
Literature search |
3 open access papers mention bta-mir-188 | |||||||
Stem-loop |
u - uc ca uc gu -ugag u 5' gcuc cc ucu ca ccuugcaug ggaggg c u |||| || ||| || ||||||||| |||||| | u 3' cgag gg agg gu gggacguac ccuccc g c c u -u ac uu ac caaaa u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence bta-miR-188 |
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Accession | MIMAT0009249 |
Sequence |
15 - caucccuugcaugguggagggu - 36 |
Deep sequencing | 407 reads, 66 experiments |
Evidence | experimental; Array [3], qRT-PCR [3] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:18945293
"Annotation of 390 bovine miRNA genes by sequence similarity with other species"
Anim Genet. 40:125(2009).
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3 |
PMID:19170227
"Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach"
Mol Reprod Dev. 76:665-677(2009).
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