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miRBase |
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Stem-loop sequence bta-mir-196a-1 |
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Accession | MI0009767 (change log) | ||||
Description | Bos taurus miR-196a-1 stem-loop | ||||
Gene family | MIPF0000031; mir-196 | ||||
Literature search |
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21 open access papers mention bta-mir-196a-1 | ||||
Stem-loop |
u a ugg ga a ua a c - gc u a 5' ga c aacugcu guga u ggu guuu auguuguug g c gg u || | ||||||| |||| | ||| |||| ||||||||| | | || 3' cu g uugacgg cacu a cca caaa uacagcaac c g uc u c c uca -- c gc c u a aa - u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence bta-miR-196a |
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Accession | MIMAT0009255 |
Sequence |
24 - uagguaguuucauguuguuggg - 45 |
Deep sequencing | 29744 reads, 57 experiments |
Evidence | by similarity; MI0010360 |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:18945293
"Annotation of 390 bovine miRNA genes by sequence similarity with other species"
Anim Genet. 40:125(2009).
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