miRBase entry: bta-mir-217

Stem-loop bta-mir-217


Accession
MI0009779
Description
Bos taurus bta-mir-217 precursor miRNA
Gene family
MIPF0000077; mir-217

Literature search
3 open access papers mention bta-mir-217
(3 sentences)

Sequence

38 reads, 10 reads per million, 10 experiments
aauauaauuaacacagaguuuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGAUaagaaucggucaccaucaguuccucaugcauugccuucagcaucuaaacaag
.................((((..(((((.(.((.((.(((((.((((((((((.((((........))).).)))))))))).))))).)).)).).))))).))))...

Structure
aauauaauuaacacaga    uu     c c  a  C     C          U -   aag 
                 guuu  gaugu g ag UA UGCAU AGGAACUGAU G GAU   a
                 ||||  ||||| | || || ||||| |||||||||| | |||    
                 caaa  cuacg c uc gu acgua uccuugacua c cug   a
--------------gaa    -u     a u  c  u     c          c a   gcu 


Annotation confidence Not enough data
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Genome context
chr11: 38641311-38641420 [-]

Database links

Mature bta-miR-217

Accession MIMAT0009267
Description Bos taurus bta-miR-217 mature miRNA
Sequence 35 - UACUGCAUCAGGAACUGAUUGGAU - 58
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125