Stem-loop bta-mir-299

Accession

MI0009787

Description

Bos taurus bta-mir-299 precursor miRNA

Gene family

MIPF0000186; mir-299

Literature search

1 open access papers mention bta-mir-299
(1 sentences)

Sequence

1603 reads, 40 reads per million, 62 experiments

aagaaaUGGUUUACCGUCCCACAUACAUucugaauauguaugugggacgguaaaccgcuucuu
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))

Structure

     a                      uc 
aagaa UGGUUUACCGUCCCACAUACAU  u
||||| ||||||||||||||||||||||  g
uucuu gccaaauggcaggguguaugua  a
     c                      ua 

Annotation confidence High

Genome context

chr21: 67841943-67842005 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from bta-mir-299

Mature bta-miR-299

• Accession: MIMAT0009274
• Description: Bos taurus bta-miR-299 mature miRNA
• Sequence: 7 - UGGUUUACCGUCCCACAUACAU - 28
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125