miRBase entry: bta-mir-302a

Stem-loop bta-mir-302a


Accession
MI0009791
Description
Bos taurus bta-mir-302a precursor miRNA
Gene family
MIPF0000071; mir-302

Literature search
5 open access papers mention bta-mir-302a
(11 sentences)

Sequence

4 reads, 0 reads per million, 3 experiments
cccaccacuuaaacguggauguacuugcuuuauagcuaaaaaaguAAGUGCUUCCAUGUUUUAGUGAugg
.(((.((((.(((((((((.(((((((((((.........))))))))))).))))))))).)))).)))

Structure
c   c    u         u           aua 
 cca cacu aaacgugga guacuugcuuu   g
 ||| |||| ||||||||| |||||||||||   c
 ggu GUGA UUUGUACCU CGUGAAugaaa   u
-   A    U         U           aaa 


Annotation confidence Not enough data
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Genome context
chr6: 14305767-14305836 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from bta-mir-302a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-302a

Accession MIMAT0009278
Description Bos taurus bta-miR-302a mature miRNA
Sequence 46 - AAGUGCUUCCAUGUUUUAGUGA - 67
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125