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miRBase |
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Stem-loop sequence bta-mir-340 |
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Accession | MI0009809 (change log) | ||||
Description | Bos taurus miR-340 stem-loop | ||||
Gene family | MIPF0000191; mir-340 | ||||
Literature search |
2 open access papers mention bta-mir-340 | ||||
Stem-loop |
--uu u au -caa u g ug 5' guacc ggugug uauaaag ugagac gauu ucaug u ||||| |||||| ||||||| |||||| |||| ||||| c 3' uaugg ccauac auauuuc acucug cuag ggugu g auuc u cg auug c - uu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
Mature sequence bta-miR-340 |
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Accession | MIMAT0009296 |
Sequence |
58 - uccgucucaguuacuuuauagcc - 80 |
Deep sequencing | 380 reads, 67 experiments |
Evidence | experimental; cloned [3] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:18945293
"Annotation of 390 bovine miRNA genes by sequence similarity with other species"
Anim Genet. 40:125(2009).
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3 |
PMID:19758457
"Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
BMC Mol Biol. 10:90(2009).
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