miRBase entry: bta-mir-346

Stem-loop bta-mir-346


Accession
MI0009810
Description
Bos taurus bta-mir-346 precursor miRNA
Gene family
MIPF0000188; mir-346

Literature search
1 open access papers mention bta-mir-346
(1 sentences)

Sequence

55 reads, 8 reads per million, 8 experiments
ggucucuguguugggcgucUGUCUGCCCGCAUGCCUGCCUCUcuguugcucugaaggaggcaggggcugggcuugcagcugccugggcagagcgg
.(.((((((..((((((.((((..((((((...((((((((.((..........)))))))))).)).))))..)))).)))))).)))))))..

Structure
-g u      gu      u    CU    -  AUG        U  guug 
  g cucugu  ugggcg cUGU  GCCC GC   CCUGCCUC cu    c
  | ||||||  |||||| ||||  |||| ||   |||||||| ||     
  c gagacg  guccgu gacg  cggg cg   ggacggag ga    u
gg -      -g      c    uu    u  --g        -  aguc 


Annotation confidence Not enough data
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Genome context
chr28: 41491751-41491845 [-]

Database links

Mature bta-miR-346

Accession MIMAT0009297
Description Bos taurus bta-miR-346 mature miRNA
Sequence 20 - UGUCUGCCCGCAUGCCUGCCUCU - 42
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125