Stem-loop bta-mir-374b

Accession

MI0009816

Description

Bos taurus bta-mir-374b precursor miRNA

Literature search

8 open access papers mention bta-mir-374b
(17 sentences)

Sequence

4657 reads, 53 reads per million, 71 experiments

gaagaaauccuacucggauggAUAUAAUACAACCUGCUAAGUGuccuagcacuuaucagguuguauuaucauuguccgugucuauggcucucguc
((((..((...((.(((((((..(((((((((((((.(((((((....))))))).)))))))))))))..))))))).))..))..)).))...

Structure

---  -  aa  ccu  u       AU             C       c 
   ga ag  au   ac cggaugg  AUAAUACAACCUG UAAGUGu c
   || ||  ||   || |||||||  ||||||||||||| |||||||  
   cu uc  ua   ug gccuguu  uauuauguuggac auucacg u
cug  c  gg  -uc  u       ac             u       a 

Annotation confidence Medium

Genome context

chrX: 82989913-82990007 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-374b

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125