Stem-loop sequence bta-mir-432

Accession MI0009831
Description Bos taurus miR-432 stem-loop
Gene family MIPF0000211; mir-432
Stem-loop 
gcaugacuccu     u u     ua       g     a   uu   uu 
           ccaag c uggag  ggucauu ggugg ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguuc g accuc  ucgguag ucacc ggg  gua  c
---------gc     u u     -c       g     -   -u   uc
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr21: 67431234-67431323 [+]
antisense
ENSBTAT00000065107 ; RTL1_BOVIN; exon 1
ENSBTAT00000065107 ; RTL1_BOVIN; exon 1
ENSBTAT00000023987 ; E1BD25_BOVIN; intron 3
Clustered miRNAs
< 10kb from bta-mir-432
bta-mir-665 chr21: 67423449-67423520 [+]
bta-mir-431 chr21: 67427770-67427883 [+]
bta-mir-433 chr21: 67428646-67428769 [+]
bta-mir-127 chr21: 67429744-67429838 [+]
bta-mir-432 chr21: 67431234-67431323 [+]
bta-mir-136 chr21: 67431418-67431509 [+]
Database links
  • ENTREZGENE: 100313048;MIR432

Mature sequence bta-miR-432

Accession MIMAT0009317
Sequence

17 -  

ucuuggaguaggucauugggugg

 - 39

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Evidence by similarity; MI0010403

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).