Stem-loop sequence bta-mir-490

Accession MI0009845
Description Bos taurus miR-490 stem-loop
Gene family MIPF0000229; mir-490
Stem-loop 
-u    -ac      g    -   aguucauu        c      --         g   cac   u 
  ggag   uugcug uuug gaa        guucgaca caugga  ucuccaggu ggu   guu a
  ||||   |||||| |||| |||        |||||||| ||||||  ||||||||| |||   |||  
  cuuc   ggcgac gaac cuu        cgaguugu guaccu  ggaggucca cca   uag g
au    aca      -    a   ------gu        c      ca         a   -ca   a
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr4: 101436258-101436384 [+]
sense
ENSBTAT00000026934 ; F1N133_BOVIN; intron 8
Database links
  • ENTREZGENE: 100313056;MIR490

Mature sequence bta-miR-490

Accession MIMAT0009331
Sequence

75 -  

caaccuggaggacuccaugcug

 - 96

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Evidence by similarity; MI0003125

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).