miRBase entry: bta-mir-599

Stem-loop bta-mir-599


Accession
MI0009876
Description
Bos taurus bta-mir-599 precursor miRNA
Gene family
MIPF0000502; mir-599


Sequence

2 reads, 0 reads per million, 1 experiments
aaagacgugcuguccacaguguguuugauaagcugacaugggacagggacucuuuucacuGUUGUGUCAGUUUAUCAAACccauacguggaugac
...........((((((.(((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))...

Structure
aaagacgugcu      a    --                 gg     -   c 
           guccac gugu  guuugauaagcugacau  gacag gga u
           |||||| ||||  |||||||||||||||||  ||||| ||| c
           uaggug caua  CAAACUAUUUGACUGUG  UUGuc cuu u
--------cag      -    cc                 --     a   u 


Annotation confidence Not enough data
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Genome context
chr14: 67323940-67324034 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-599

Accession MIMAT0009354
Description Bos taurus bta-miR-599 mature miRNA
Sequence 61 - GUUGUGUCAGUUUAUCAAAC - 80
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125