miRBase entry: bta-mir-670

Stem-loop bta-mir-670


Accession
MI0009886
Description
Bos taurus bta-mir-670 precursor miRNA
Gene family
MIPF0000734; mir-670

Literature search
2 open access papers mention bta-mir-670
(2 sentences)

Sequence

171 reads, 8 reads per million, 52 experiments
gguuuagggguggaucugacgUCCCUGAGUAUAUGUGGUGAAccggaauuugccugggguuuccucauauucauucaggagugucaguucucccugcgc
.((.((((((.(((.((((((.(((((((((((((.((.(((((((......))...))))))).)))))..))))))).)))))))))))))))).))

Structure
g  u      u   u      U -       --     U  U     ---  aa 
 gu uagggg gga cugacg C CCUGAGU  AUAUG GG GAAcc   gg  u
 || |||||| ||| |||||| | |||||||  ||||| || |||||   ||   
 cg gucccu cuu gacugu g ggacuua  uauac cc uuugg   cc  u
-  c      -   -      - a       cu     u  -     ggu  gu 


Annotation confidence Not enough data
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Genome context
chr15: 74872328-74872426 [+]

Database links

Mature bta-miR-670

Accession MIMAT0009364
Description Bos taurus bta-miR-670 mature miRNA
Sequence 22 - UCCCUGAGUAUAUGUGGUGAA - 42
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125