Stem-loop sequence bta-mir-875

Accession MI0009901
Description Bos taurus miR-875 stem-loop
Gene family MIPF0000424; mir-875
Stem-loop 
--      gg  uau        u  a       uuau 
  uuagug  ac   accucagu uu ucaggug    u
  ||||||  ||   |||||||| || |||||||    u
  agucac  ug   uggaguca aa gguccac    a
ca      uu  ugu        u  a       uaaa
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr14: 66995017-66995093 [+]
intergenic
Clustered miRNAs
< 10kb from bta-mir-875
bta-mir-875 chr14: 66995017-66995093 [+]
bta-mir-599 chr14: 66995149-66995243 [+]
Database links
  • ENTREZGENE: 100313271;MIR875

Mature sequence bta-miR-875

Accession MIMAT0009379
Sequence

11 -  

uauaccucaguuuuaucaggug

 - 32

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Evidence by similarity; MI0010430

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).