miRBase entry: bta-mir-875

Stem-loop bta-mir-875


Accession
MI0009901
Description
Bos taurus bta-mir-875 precursor miRNA
Gene family
MIPF0000424; mir-875


Sequence

uuagugggacUAUACCUCAGUUUUAUCAGGUGuuauuuaaaaucaccuggaaauacugagguuguguuucacugaac
((((((((((...((((((((.((.(((((((...........))))))).)).))))))))...))))))))))..

Structure
--          UAU        U  A       uuau 
  uuagugggac   ACCUCAGU UU UCAGGUG    u
  ||||||||||   |||||||| || |||||||    u
  agucacuuug   uggaguca aa gguccac    a
ca          ugu        u  a       uaaa 


Annotation confidence Not enough data
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Genome context
chr14: 67323808-67323884 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-875
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-875

Accession MIMAT0009379
Description Bos taurus bta-miR-875 mature miRNA
Sequence 11 - UAUACCUCAGUUUUAUCAGGUG - 32
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125