Stem-loop bta-mir-935

Accession

MI0009908

Description

Bos taurus bta-mir-935 precursor miRNA

Gene family

MIPF0000606; mir-935

Sequence

9 reads, 2 reads per million, 6 experiments

ggcgggggcgcgggcggcaguggcgggagcggccccucggccauccuccgucugcCCAGUUACCGCUUCCGCUACCGCcgccgcucccgcu
(((((((((...((((((.(((((((((((((...((.(((............))).))...))))))))))))).)))))))))))))))

Structure

         gcg      a             ccc  c   caucc 
ggcgggggc   ggcggc guggcgggagcgg   cu ggc     u
|||||||||   |||||| |||||||||||||   || |||      
ucgcccucg   ccgcCG CAUCGCCUUCGCC   GA Ccg     c
         ---      C             AUU  C   ucugc 

Annotation confidence Not enough data

Genome context

chr18: 62402146-62402236 [+]

Mature bta-miR-935

• Accession: MIMAT0009385
• Description: Bos taurus bta-miR-935 mature miRNA
• Sequence: 56 - CCAGUUACCGCUUCCGCUACCGC - 78
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125