miRBase entry: mmu-mir-1966

Stem-loop mmu-mir-1966


Accession
MI0009963
Symbol
MGI: Mir1966
Description
Mus musculus mmu-mir-1966 precursor miRNA


Sequence

116 reads, 5 reads per million, 41 experiments
guagaauaguguuggAAGGGAGCUGGCUCAGGAGAGAGUCcugagauuuaggcucUUUCUGACUCAACUCUCCCUUAGcaagucaaguccauugaacgcuuucuucga
(.((((.((((((.((..((((((.(((.(((.((((((..((((..(((((.....)))))))))))))))))).))).)))....))).)).)))))))))).)..

Structure
-- u    u      g  AG   ----   G   C   A      Cc    au     c 
  g agaa aguguu gA  GGA    GCU GCU AGG GAGAGU  ugag  uuagg u
  | |||| |||||| ||  |||    ||| ||| ||| ||||||  ||||  ||||| c
  c ucuu ucgcaa uu  ccu    uga cGA UCC CUCUCA  ACUC  AGUCU U
ag u    -      g  -a   gaac   a   U   -      --    --     U 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 105615466-105615573 [+]

Database links

Mature mmu-miR-1966-5p

Accession MIMAT0009439
Description Mus musculus mmu-miR-1966-5p mature miRNA
Sequence 16 - AAGGGAGCUGGCUCAGGAGAGAGUC - 40
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-1966-3p

Accession MIMAT0022952
Description Mus musculus mmu-miR-1966-3p mature miRNA
Sequence 56 - UUUCUGACUCAACUCUCCCUUAG - 78
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797