miRBase entry: mmu-mir-1971

Stem-loop mmu-mir-1971


Accession
MI0009970
Symbol
MGI: Mir1971
Description
Mus musculus mmu-mir-1971 precursor miRNA

Literature search
2 open access papers mention mmu-mir-1971
(25 sentences)

Sequence

10 reads, 1 reads per million, 9 experiments
gcaucauuugGUAAAGGCUGGGCUGAGAggacaucuuuguuccauggacccaguagauaggcagcuucugcuuccaggaacaacuugucuguuuuucagucuaucu
..............(((.(((((((((((((((...(((((((.((((...((((((.((....)))))))))))))))))))..)))))...)))))))))))))

Structure
gcaucauuugGUAA   C          ---     ucu       a    ccc      u  g 
              AGG UGGGCUGAGA   ggaca   uuguucc ugga   aguaga ag c
              ||| ||||||||||   |||||   ||||||| ||||   |||||| ||  
              ucu aucugacuuu   ucugu   aacaagg accu   ucgucu uc a
--------------   -          uug     -uc       -    ---      -  g 


Annotation confidence Not enough data
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Genome context
chr14: 78191373-78191478 [-]

Database links

Mature mmu-miR-1971

Accession MIMAT0009446
Description Mus musculus mmu-miR-1971 mature miRNA
Sequence 11 - GUAAAGGCUGGGCUGAGA - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797