Stem-loop sly-MIR156c

Accession

MI0009973

Description

Solanum lycopersicum sly-MIR156c precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

33 open access papers mention sly-MIR156c
(160 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACgaauaacgaggugcuaauuggaacaugcaccuuaauucuuugugcucucauucuuuugucau
.((((((((((..(((((((((((....(((((((............))))))).....)))))))))))..)))))))))).

Structure

U          UA           -uaac       uaauu 
 UGACAGAAGA  GAGAGCACgaa     gaggugc     g
 ||||||||||  |||||||||||     |||||||      
 acuguuuucu  cucucguguuu     uuccacg     g
u          ua           cuuaa       uacaa 

Annotation confidence Not enough data

Comments

This sequence was named MIR157c in [1].

Genome context

Unknown

Mature sly-miR156c

• Accession: MIMAT0009140
• Description: Solanum lycopersicum sly-miR156c mature miRNA
• Sequence: 1 - UUGACAGAAGAUAGAGAGCAC - 21
• Evidence: not_experimental

References

1. PubMed ID: 18602455
   Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill
   "Zhang J, Zeng R, Chen J, Liu X, Liao Q"
   "Gene (2008) 423:1-7