Stem-loop bkv-mir-B1

Accession

MI0009981

Description

BK polyomavirus bkv-mir-B1 precursor miRNA

Gene family

MIPF0000637; mir-B1

Sequence

gggaaucuucagcaggggcugaaguAUCUGAGACUUGGGAAGAGCAUugugauugggauucagUGCUUGAUCCAUGUCCAGAGUCuucaguuucugaauccu
((((........((((((((((((..((((.(((.((((..((((((((...........))))))))..)))).)))))))..))))))))))))..))))

Structure

    aucuucag            uA    A   U    AA        ugau 
ggga        caggggcugaag  UCUG GAC UGGG  GAGCAUug    u
||||        ||||||||||||  |||| ||| ||||  ||||||||    g
uccu        gucuuugacuuC  AGAC CUG ACCU  UUCGUgac    g
    ------aa            UG    -   U    AG        uuag 

Annotation confidence Not enough data

Genome context

Unknown

Disease association

bkv-mir-B1 is associated with one or more human diseases in the Human microRNA Disease Database

Mature bkv-miR-B1-5p

• Accession: MIMAT0009149
• Description: BK polyomavirus bkv-miR-B1-5p mature miRNA
• Sequence: 26 - AUCUGAGACUUGGGAAGAGCAU - 47
• Evidence: experimental ; cloned [1], Northern [1]

Mature bkv-miR-B1-3p

• Accession: MIMAT0009150
• Description: BK polyomavirus bkv-miR-B1-3p mature miRNA
• Sequence: 64 - UGCUUGAUCCAUGUCCAGAGUC - 85
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 18684810
   Evolutionarily conserved function of a viral microRNA
   "Seo GJ, Fink LH, O'Hara B, Atwood WJ, Sullivan CS"
   "J Virol (2008) 82:9823-9828