miRBase entry: bfl-mir-124

Stem-loop bfl-mir-124


Accession
MI0010026
Description
Branchiostoma floridae bfl-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124


Sequence

cggcaaaucucggcuuggcucuuAGUGUUCACGGCGGUCCUUAAUuuaacauugugcaauUAAGGCACGCGGUGAAUGCCAAgaacagggccaaauccuca
...........(((((.(.((((.((((((((.(((..((((((((..((...))..))))))))..))).)))))))).)))).).))))).........

Structure
cggcaaaucuc     g c    A        G   GU        ua  a 
           ggcuu g ucuu GUGUUCAC GCG  CCUUAAUu  ac  
           ||||| | |||| |||||||| |||  ||||||||  || u
           ccggg c agAA CGUAAGUG CGC  GGAAUuaa  ug  
--acuccuaaa     a a    C        G   AC        cg  u 


Annotation confidence Not enough data
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Genome context
GG666480.1: 1879911-1880011 [+]

Database links

Mature bfl-miR-124-3p

Accession MIMAT0009482
Description Branchiostoma floridae bfl-miR-124-3p mature miRNA
Sequence 61 - UAAGGCACGCGGUGAAUGCCAA - 82
Evidence experimental
454 [1]

Mature bfl-miR-124-5p

Accession MIMAT0019146
Description Branchiostoma floridae bfl-miR-124-5p mature miRNA
Sequence 24 - AGUGUUCACGGCGGUCCUUAAU - 45
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27