Stem-loop bfl-mir-182a

Accession

MI0010030

Description

Branchiostoma floridae bfl-mir-182a precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

aaucauuugggcuuaauuugCUUGGCACUAGUGGAAUUCUUUGuucaggaaacagugcauggagccauugagucaaagaauuccccaguaccaagcaaauu
..............(((((((((((.(((.(.(((((((((((((((((...((.....))...))..)))).)))))))))))).))).)))))))))))

Structure

aaucauuugggcuu           C   A U           -    --  aaa  g 
              aauuugCUUGG ACU G GGAAUUCUUUG uuca  gg   ca u
              ||||||||||| ||| | ||||||||||| ||||  ||   || g
              uuaaacgaacc uga c ccuuaagaaac gagu  cc   gu c
--------------           a   c -           u    ua  gag  a 

Annotation confidence Not enough data

Genome context

GG666785.1: 120315-120415 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-182a

Mature bfl-miR-182a

• Accession: MIMAT0009486
• Description: Branchiostoma floridae bfl-miR-182a mature miRNA
• Sequence: 21 - CUUGGCACUAGUGGAAUUCUUUG - 43
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68