miRBase entry: bfl-mir-183

Stem-loop bfl-mir-183


Accession
MI0010031
Description
Branchiostoma floridae bfl-mir-183 precursor miRNA
Gene family
MIPF0000066; mir-183


Sequence

ccacgugcccguucacggucUAUGGCACUGGUAGAAUUCACUgaucguagacaccagugauucuucagucagccauacaccguggcgggaaacugaucauc
.((.((.(((((.((((((.(((((((((((.(((((.(((((...........)))))))))))))))..)))))).)))))))))))..))))......

Structure
-----c  c  -g     u      c      --     U     U     aucg 
      ca gu  cccgu cacggu UAUGGC  ACUGG AGAAU CACUg    u
      || ||  ||||| |||||| ||||||  ||||| ||||| |||||    a
      gu ca  gggcg gugcca auaccg  ugacu ucuua gugac    g
cuacua  -  aa     -      c      ac     -     -     caca 


Annotation confidence Not enough data
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Genome context
GG666602.1: 1108717-1108817 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-183
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-183

Accession MIMAT0009487
Description Branchiostoma floridae bfl-miR-183 mature miRNA
Sequence 21 - UAUGGCACUGGUAGAAUUCACU - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68