Stem-loop bfl-mir-210

Accession

MI0010038

Description

Branchiostoma floridae bfl-mir-210 precursor miRNA

Gene family

MIPF0000086; mir-210

Sequence

acaguuggucgguggcauuCGCCUCUGUUUCGCGCGCAAGAugugauguuaguccugcucCUGUGCGUGUGACAGCGGCUGAugcaccggccaaaacgucg
....((((((((((.((((.(((.(((((.((((((((.((.(((((....)))..)))).)))))))).))))).))).)))))))))))))).......

Structure

---acag          g    C   U     U        A  u  --   g 
       uuggucggug cauu GCC CUGUU CGCGCGCA GA gu  gau u
       |||||||||| |||| ||| ||||| |||||||| || ||  |||  
       aaccggccac guAG CGG GACAG GUGCGUGU cu cg  cug u
gcugcaa          -    U   C     U        C  -  uc   a 

Annotation confidence Not enough data

Genome context

GG666487.1: 678318-678418 [-]

Mature bfl-miR-210-3p

• Accession: MIMAT0009494
• Description: Branchiostoma floridae bfl-miR-210-3p mature miRNA
• Sequence: 61 - CUGUGCGUGUGACAGCGGCUGA - 82
• Evidence: experimental ; 454 [1]

Mature bfl-miR-210-5p

• Accession: MIMAT0019149
• Description: Branchiostoma floridae bfl-miR-210-5p mature miRNA
• Sequence: 20 - CGCCUCUGUUUCGCGCGCAAGA - 41
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27