Stem-loop bfl-mir-252a

Accession

MI0010042

Description

Branchiostoma floridae bfl-mir-252a precursor miRNA

Gene family

MIPF0000285; mir-252

Sequence

agugauuguccugccccaugCUAAGUACUAGUGCCGCAGGUGUcuguuuauuguaccccugcagacuggugcuuaacguggaacagguaauaaugccaccc
.((((((((((((..(((((.(((((((((((.(.(((((.(((........).)).))))).)))))))))))).)))))..))))..)))))..)))..

Structure

-a   --     --    cc     C           G C     U  - ugu 
  gug  auugu  ccug  ccaug UAAGUACUAGU C GCAGG GU c   u
  |||  |||||  ||||  ||||| ||||||||||| | ||||| || |    
  cac  uaaua  ggac  ggugc auucgugguca g cgucc ca g   u
cc   cg     au    aa     a           - a     c  u uua 

Annotation confidence Not enough data

Genome context

GG666517.1: 1038954-1039054 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-252a

Mature bfl-miR-252a

• Accession: MIMAT0009498
• Description: Branchiostoma floridae bfl-miR-252a mature miRNA
• Sequence: 21 - CUAAGUACUAGUGCCGCAGGUGU - 43
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68