miRBase entry: bfl-mir-375

Stem-loop bfl-mir-375


Accession
MI0010045
Description
Branchiostoma floridae bfl-mir-375 precursor miRNA
Gene family
MIPF0000114; mir-375


Sequence

gccacaucccugcccagacaggccgagccuggcgagcaaagcugugucuaaacuuaacguuuUGUUCGUUCGGCUCGCGUUAUCUuggcaugggcuaucgu
.......(((((((.(((..(((((((((.((((((((((((.((...........)))))))))))))).)))))).))).))).)))).))).......

Structure
gccacau   -    c   ca   -      u            u  gucu 
       ccc ugcc aga  ggc cgagcc ggcgagcaaagc gu    a
       ||| |||| |||  ||| |||||| |||||||||||| ||    a
       ggg acgg UCU  UUG GCUCGG UUGCUUGUuuug ca    a
ugcuauc   u    u   -A   C      C            -  auuc 


Annotation confidence Not enough data
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Genome context
GG666701.1: 289785-289885 [-]

Database links

Mature bfl-miR-375

Accession MIMAT0009501
Description Branchiostoma floridae bfl-miR-375 mature miRNA
Sequence 63 - UGUUCGUUCGGCUCGCGUUAUCU - 85
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68