miRBase entry: cte-mir-71

Stem-loop cte-mir-71


Accession
MI0010061
Description
Capitella teleta cte-mir-71 precursor miRNA
Gene family
MIPF0000278; mir-71


Sequence

agacaauacagaggagcuccaUGAAAGACAUGGGUAGUGAGAUGuacacugucucuaaucaccuugcuaucaugucuuuccauggagaacucuuaucgaua
.........((((...(((((((((((((((((.(((((((.((...............)).))))))))))))))))).)))))))..))))........

Structure
agacaauac    gag       -          G       A  uacacu 
         agag   cuccaUG AAAGACAUGG UAGUGAG UG      g
         ||||   ||||||| |||||||||| ||||||| ||      u
         ucuc   gagguac uuucuguacu aucguuc ac      c
-auagcuau    -aa       c          -       c  uaaucu 


Annotation confidence Not enough data
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Genome context
KB312122.1: 9913-10013 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cte-mir-71
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-71

Accession MIMAT0009517
Description Capitella teleta cte-miR-71 mature miRNA
Sequence 22 - UGAAAGACAUGGGUAGUGAGAUG - 44
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68