miRBase entry: cte-mir-279

Stem-loop cte-mir-279


Accession
MI0010083
Description
Capitella teleta cte-mir-279 precursor miRNA
Gene family
MIPF0000184; mir-279


Sequence

cguuucgcugucgccuugaauggcuguggaucaaguccauguuaagauuucgaauugucaUGACUAGAUCCACACUCAUCCagguuggcggcuagcccuuc
.(((..(((((((.((((.((((.((((((((.((((.(((.(((.........))).))))))).)))))))).)))).)))).))))))).))).....

Structure
----c   uc       c    a    c        a    c   u   gau 
     guu  gcugucg cuug augg uguggauc aguc aug uaa   u
     |||  ||||||| |||| |||| |||||||| |||| ||| |||   u
     cga  cggcggu ggaC UACU ACACCUAG UCAG Uac guu   c
cuucc   -u       u    C    C        A    -   u   aag 


Annotation confidence Not enough data
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Genome context
KB297234.1: 703501-703601 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-279
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-279

Accession MIMAT0009539
Description Capitella teleta cte-miR-279 mature miRNA
Sequence 61 - UGACUAGAUCCACACUCAUCC - 81
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68