miRBase entry: lgi-mir-34

Stem-loop lgi-mir-34


Accession
MI0010111
Description
Lottia gigantea lgi-mir-34 precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

aacagagugggugugguucugUGGCAGUGUGGUUAGCUGGUAGUucaugauuuaaaacaaccacuaucuacauugccccgaaaacgcacaaaaugaacgac
..........(((((.(((.(.((((((((((.(((.((((.(((..........))).))))))).))))))))))).)))..)))))............

Structure
--aacagagugg     -g   u U          U   C    A   caug 
            gugug  uuc g GGCAGUGUGG UAG UGGU GUu    a
            |||||  ||| | |||||||||| ||| |||| |||     
            cacgc  aag c ccguuacauc auc acca caa    u
cagcaaguaaaa     aa   c -          u   -    a   aauu 


Annotation confidence Not enough data
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Genome context
KB199651.1: 1151253-1151353 [+]

Database links

Mature lgi-miR-34

Accession MIMAT0009569
Description Lottia gigantea lgi-miR-34 mature miRNA
Sequence 22 - UGGCAGUGUGGUUAGCUGGUAGU - 44
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68