Stem-loop lgi-mir-100

Accession

MI0010119

Description

Lottia gigantea lgi-mir-100 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

auuagugacuaguuaauauaAACCCGUAGAUCCGAACUUGUGauaaaaucugacgcaagcuuguuucuagggguccuauauuggcuaggguaucuacagau
..(((...((((((((((((.((((.((((..(((.((((((...........)))))).)))..)))).))))..)))))))))))).....))).....

Structure

---au   --uga            -A    G    UC   A      auaa 
     uag     cuaguuaauaua  ACCC UAGA  CGA CUUGUG    a
     |||     ||||||||||||  |||| ||||  ||| ||||||    a
     auc     gaucgguuauau  uggg aucu  guu gaacgc    u
uagac   uaugg            cc    g    uu   c      aguc 

Annotation confidence Not enough data

Genome context

KB200869.1: 2793558-2793658 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-100

Mature lgi-miR-100

• Accession: MIMAT0009577
• Description: Lottia gigantea lgi-miR-100 mature miRNA
• Sequence: 21 - AACCCGUAGAUCCGAACUUGUG - 42
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68