Stem-loop lgi-mir-1175

Accession

MI0010142

Description

Lottia gigantea lgi-mir-1175 precursor miRNA

Gene family

MIPF0000715; mir-1175

Sequence

uguucaauguAGUGGAGAGAGUUUUAUCUCAUcucucaaacaaaacagaUGAGAUUCAACUCCUCCAACUGCaaguuucaccuguuu
.......((((((((((.(((((..(((((((((............)))))))))..))))))))).))))))..............

Structure

-------uguucaa      -    A     UU         cucaa 
              uguAGU GGAG GAGUU  AUCUCAUcu     a
              |||||| |||| |||||  |||||||||      
              aCGUCA CCUC CUCAA  UAGAGUaga     c
uuuguccacuuuga      A    -     CU         caaaa 

Annotation confidence Not enough data

Genome context

KB201589.1: 116351-116437 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-1175

Mature lgi-miR-1175-5p

• Accession: MIMAT0009602
• Description: Lottia gigantea lgi-miR-1175-5p mature miRNA
• Sequence: 11 - AGUGGAGAGAGUUUUAUCUCAU - 32
• Evidence: not_experimental

Mature lgi-miR-1175-3p

• Accession: MIMAT0009603
• Description: Lottia gigantea lgi-miR-1175-3p mature miRNA
• Sequence: 50 - UGAGAUUCAACUCCUCCAACUGC - 72
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68