miRBase entry: sko-mir-31

Stem-loop sko-mir-31


Accession
MI0010152
Description
Saccoglossus kowalevskii sko-mir-31 precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

aaaauucgcaaauuuaguggAGGCAAGAUGUUGGCAUAGCUGuuucgauugaacagucagcuguguccucauauugcccuuucuuuguuugucaccgucac
.......((((((..((.((.(((((.(((..((((((((((...............))))))))))..))).)))))))..))..)))))).........

Structure
--aaaauuc      uu  -u  A     G   UU          uuucga 
         gcaaau  ag  gg GGCAA AUG  GGCAUAGCUG      u
         ||||||  ||  || ||||| |||  ||||||||||      u
         uguuug  uc  uc ccguu uac  cugugucgac      g
cacugccac      uu  uu  -     a   uc          ugacaa 


Annotation confidence Not enough data
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Genome context
GL014644.1: 76886-76986 [+]

Database links

Mature sko-miR-31

Accession MIMAT0009614
Description Saccoglossus kowalevskii sko-miR-31 mature miRNA
Sequence 21 - AGGCAAGAUGUUGGCAUAGCUG - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68