miRBase entry: sko-mir-33

Stem-loop sko-mir-33


Accession
MI0010153
Description
Saccoglossus kowalevskii sko-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

ggacauugcuugucucuguggugcauuguaguugcauugcauguacgauacacucugCAGUGCUUCUGCAGUGCAAACAcagagccaagaccauucaccau
((....((((((.(((((((.((((((((((..((((((((((((...))))...))))))))..))))))))))..))))))).))))..))....))..

Structure
--  acau  --    u       -g          uu        ---    c 
  gg    ug  cuug cucugug  ugcauuguag  gcauugca   ugua  
  ||    ||  |||| |||||||  ||||||||||  ||||||||   |||| g
  cc    ac  gaac gagacAC  ACGUGACGUC  CGUGACgu   acau  
ua  acuu  ca    c       AA          UU        cuc    a 


Annotation confidence Not enough data
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Genome context
GL015469.1: 582663-582763 [+]

Database links

Mature sko-miR-33-3p

Accession MIMAT0009615
Description Saccoglossus kowalevskii sko-miR-33-3p mature miRNA
Sequence 58 - CAGUGCUUCUGCAGUGCAAACA - 79
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68