Stem-loop sko-mir-210

Accession

MI0010172

Description

Saccoglossus kowalevskii sko-mir-210 precursor miRNA

Sequence

ugucacuauccaggccgggaagggAGUUGCCGGAGCAUUGCACAACAauuuuuauguaugUUGUGCGUGCGACAGCGACUUCcguccgccugauacuuuac
..........(((((..(((.(((((((((.(..((((.((((((((((......)).))))))))))))..).))))))))).)))))))).........

Structure

ugucacuauc     cg   a         C GA    U        -  uu 
          caggc  gga gggAGUUGC G  GCAU GCACAACA au  u
          |||||  ||| ||||||||| |  |||| |||||||| ||   
          guccg  ccu cCUUCAGCG C  CGUG CGUGUUgu ug  u
-cauuucaua     --   g         A AG    -        a  ua 

Annotation confidence Not enough data

Genome context

GL014552.1: 344767-344867 [-]

Mature sko-miR-210-3p

• Accession: MIMAT0009636
• Description: Saccoglossus kowalevskii sko-miR-210-3p mature miRNA
• Sequence: 61 - UUGUGCGUGCGACAGCGACUUC - 82
• Evidence: experimental ; 454 [1]

Mature sko-miR-210-5p

• Accession: MIMAT0019158
• Description: Saccoglossus kowalevskii sko-miR-210-5p mature miRNA
• Sequence: 25 - AGUUGCCGGAGCAUUGCACAACA - 47
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27