miRBase entry: spu-mir-10

Stem-loop spu-mir-10


Accession
MI0010190
Description
Strongylocentrotus purpuratus spu-mir-10 precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
0 open access papers mention spu-mir-10
(0 sentences)

Sequence

uuucuucacuuuuugggcuuacaucAACCCUGUAGAUCCGAAUUUGUGuccgaguuucucgccucugguagucacagauucguaucucuggguaacuguaucccaggacu
..........(((((((..((((...((((.(.((((.((((((((((.(((((........))).))....)))))))))).))))).))))...)))).)))))))..

Structure
uuucuucacu       cu    ucA    U U    C          ---u  -   uuu 
          uuuuggg  uaca   ACCC G AGAU CGAAUUUGUG    cc gag   c
          |||||||  ||||   |||| | |||| ||||||||||    || |||    
          aggaccc  augu   uggg c ucua gcuuagacac    gg cuc   u
--------uc       -u    caa    u -    u          ugau  u   cgc 


Annotation confidence Not enough data
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Genome context
KN918371.1: 533814-533923 [+]

Database links

Mature spu-miR-10

Accession MIMAT0009654
Description Strongylocentrotus purpuratus spu-miR-10 mature miRNA
Sequence 26 - AACCCUGUAGAUCCGAAUUUGUG - 48
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68