miRBase entry: spu-mir-133

Stem-loop spu-mir-133


Accession
MI0010204
Description
Strongylocentrotus purpuratus spu-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133

Literature search
1 open access papers mention spu-mir-133
(9 sentences)

Sequence

uccggaaaauguagcgcuuuagcugguaaacgggaaccaaaucgugaaguaaaugcggaUUUGGUCCCCUUCAACCAGCCGUagcacugcauucuagacaa
((.(((..((((((.(((...((((((....(((.((((((((..............)))))))).)))....))))))...))).))))))))).))...

Structure
---  c   aa      c   uua      aaac   a        gugaag 
   uc gga  auguag gcu   gcuggu    ggg accaaauc      u
   || |||  |||||| |||   ||||||    ||| ||||||||       
   ag ucu  uacguc cga   CGACCA    CCC UGGUUUag      a
aac  a   --      a   UGC      ACUU   C        gcguaa 


Annotation confidence Not enough data
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Genome context
KN918585.1: 456917-457017 [+]

Database links

Mature spu-miR-133

Accession MIMAT0009668
Description Strongylocentrotus purpuratus spu-miR-133 mature miRNA
Sequence 60 - UUUGGUCCCCUUCAACCAGCCGU - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68