miRBase entry: spu-mir-153

Stem-loop spu-mir-153


Accession
MI0010205
Description
Strongylocentrotus purpuratus spu-mir-153 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

cccgccagcccgaUCAUUUUUGUGUUUAUGCAACUuuuguauuuucaccgaucagaguagUUGCAUAGUCACAAAAGUGAUUgggaggguugggcucuaac
((((((..((((((((((((((((.((((((((((((((.(((......)))))))..)))))))))).))))))))))))))))..)).)))).......

Structure
-------    -  ag                U          --    u   uu 
       cccg cc  cccgaUCAUUUUUGUG UUAUGCAACU  uuug auu  c
       |||| ||  |||||||||||||||| ||||||||||  |||| |||   
       gggu gg  gggUUAGUGAAAACAC GAUACGUUga  agac uag  a
caaucuc    u  ga                U          ug    -   cc 


Annotation confidence Not enough data
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Genome context
KN916494.1: 661159-661259 [+]

Database links

Mature spu-miR-153-3p

Accession MIMAT0009669
Description Strongylocentrotus purpuratus spu-miR-153-3p mature miRNA
Sequence 61 - UUGCAUAGUCACAAAAGUGAUU - 82
Evidence experimental
454 [1]

Mature spu-miR-153-5p

Accession MIMAT0019162
Description Strongylocentrotus purpuratus spu-miR-153-5p mature miRNA
Sequence 14 - UCAUUUUUGUGUUUAUGCAACU - 35
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27