Stem-loop sequence cte-mir-2d

Accession MI0010214
Previous IDs cap-mir-2d
Description Capitella teleta miR-2d stem-loop
Stem-loop 
cacccucauu       u   cu          -       uc   -u  c 
          gagaacc gca  ugaucaaggu ggcugug  uug  gu c
          ||||||| |||  |||||||||| |||||||  |||  || a
          uuuuugg cgu  acugguuucg ccgacac  aac  cg c
---ccacuac       u   uu          u       ua   uu  u
Get sequence
Deep sequencing
4 reads, 1 experiments
Genome context
Coordinates (JGI1.0) Overlapping transcripts
scaffold_36111: 1031-1130 [+]
intergenic
scaffold_876: 29229-29328 [-]
intergenic
Clustered miRNAs
< 10kb from cte-mir-2d
cte-mir-2e scaffold_36111: 917-1016 [+]
cte-mir-2d scaffold_36111: 1031-1130 [+]

Mature sequence cte-miR-2d

Accession MIMAT0009678
Previous IDs cap-miR-2d
Sequence

60 -  

aaucacagccugcuuuggucau

 - 81

Get sequence
Deep sequencing 4 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).