miRBase entry: cte-mir-1987

Stem-loop cte-mir-1987


Accession
MI0010232
Description
Capitella teleta cte-mir-1987 precursor miRNA


Sequence

aaucacgacuuuacuucugagcaucuuguucuuggcugcaaACUGCCAGAUGUAAUGUUGUGCacgaa
...((((((.((((.((((.(((..((((........))))..))))))).)))).))))))......

Structure
---aau      u    u    a   uc    ucu 
      cacgac uuac ucug gca  uugu   u
      |||||| |||| |||| |||  ||||    
      GUGUUG AAUG AGAC CGU  aacg   g
aagcaC      U    U    -   CA    ucg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB293301.1: 378001-378068 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-1987
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-1987

Accession MIMAT0009703
Description Capitella teleta cte-miR-1987 mature miRNA
Sequence 42 - ACUGCCAGAUGUAAUGUUGUGC - 63
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68