miRBase entry: cte-mir-1996a

Stem-loop cte-mir-1996a


Accession
MI0010236
Description
Capitella teleta cte-mir-1996a precursor miRNA


Sequence

ucgcuguCUCAAGUGAGGUCAGUGCUGCUguguuuucuaacaggggcacugucuucaauugaaaccguug
..((.((.((((.(((((.(((((((.((((........)))).))))))).))))).)))).)).))..

Structure
uc  u  C    G     U       G    guu 
  gc gu UCAA UGAGG CAGUGCU CUgu   u
  || || |||| ||||| ||||||| ||||    
  ug ca aguu acuuc gucacgg gaca   u
gu  c  a    a     u       g    auc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB295515.1: 125995-126064 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cte-mir-1996a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cte-miR-1996a

Accession MIMAT0009707
Description Capitella teleta cte-miR-1996a mature miRNA
Sequence 8 - CUCAAGUGAGGUCAGUGCUGCU - 29
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68