miRBase entry: lgi-mir-1984

Stem-loop lgi-mir-1984


Accession
MI0010255
Description
Lottia gigantea lgi-mir-1984 precursor miRNA


Sequence

augccuUGCCCUAUCCGUCAGGAACUGUGauauaguuaauagacacagugccuaucgguagggaacagu
........(((((.(((..(((.((((((.(((.....)))..)))))).)))..))))))))......

Structure
augccuUG     U   UC   A      -a   a 
        CCCUA CCG  AGG ACUGUG  uau g
        ||||| |||  ||| ||||||  ||| u
        gggau ggc  ucc ugacac  aua u
--ugacaa     -   ua   g      ag   a 


Annotation confidence Not enough data
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Genome context
KB202283.1: 4879129-4879197 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lgi-mir-1984
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lgi-miR-1984

Accession MIMAT0009726
Description Lottia gigantea lgi-miR-1984 mature miRNA
Sequence 7 - UGCCCUAUCCGUCAGGAACUGUG - 29
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68